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11-1869-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4793524 [Map]; Strand: w
      • AT5G14820.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1869-1 - 3-prime edge 
    TTAGTGATGG ATGTGATGAA GAAGTTGAAT CTGAATGCGA TAATGATGAA 
    GAAACTGGGG TCAGTTGTGT TGAATCAAGT ACTAATCCGG AAGAAGTAGA 
    GAGAGTCTGC AAAGTGATTG ATGAATTGTT TGCGTTAGAT AGAAATATGG 
    AAGCNTGTTC TTGATGAAAT GAAACTAGAT TTATCACATG ATCTCATCGT 
    TGAGGTTTTA GAACGTTTTC GACATGCTAG GAAGCCTGCA TTTAGGTTCT 
    TCTGTTGGGC TGCAGAGAGA CAAGGATTTG CTCATGACTC AAGAACATAT 
    AACTCCATGA TGAGTATTTT AGCAAAGACT AGACAGTTCG AGACGATGGT 
    TTCGGTACTC GAAGAGATGG GTACGAAAGG TCTATTGACG ATGGAGACAT 
    TCACTATCGC GATGAAAGCT

AT5G14820.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 37965 Blast hits to 11999 proteins in 283 species: Archae - 3; Bacteria - 24; Metazoa - 443; Fungi - 549; Plants - 35727; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink).
Link
InterPro Scan - TAIR