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Mutant Lines
11-1609-1

11-1609-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 23426289 [Map]; Strand: w
  - AT3G63445.2 - [+] show detail - other RNA
    Distance: 0; Region: exon1 (NonCoding)
  - AT3G63445.3 - [+] show detail - other RNA
    Distance: -61; Region: promoter
  - AT3G63445.1 - [+] show detail - other RNA
    Distance: 0; Region: exon1 (NonCoding)
  - AT3G63440.1 - [+] show detail - cytokinin oxidase/dehydrogenase 6
    Distance: 0; Region: exon5 (3UTR)
Flanking Genome Sequence: 11-1609-1 - 5-prime edge
```
CTTGCGCCTG GCCACCGAAT TTTTCAAAAG GCAGTCTCAT ACTCATGACC 
CGTCGTCTCG TGGAATTATT TAGGGCC
```
3 prime edge [+] show sequence
1. Chromosome: 3; Position: 23426173 [Map]; Strand: w
  - AT3G63445.2 - [+] show detail - other RNA
    Distance: 0; Region: exon1 (NonCoding)
  - AT3G63445.3 - [+] show detail - other RNA
    Distance: 0; Region: exon1 (NonCoding)
  - AT3G63445.1 - [+] show detail - other RNA
    Distance: 0; Region: exon1 (NonCoding)
  - AT3G63440.1 - [+] show detail - cytokinin oxidase/dehydrogenase 6
    Distance: 0; Region: exon5 (CDS)
Flanking Genome Sequence: 11-1609-1 - 3-prime edge
```
GGCGCAAGAA TTGCCAATGG ATCATATCTG GATTTCCTCC TCACAAATTC 
TCCCCACTTG TCCCCGAAAT GGGATCTCCA CTCTTCTCTT GTCGTGTAAT 
GTGGCAGATA CTGCTTCAAC CCTATCCCTG CTTCTTCACT GAATTCCAGT 
ATTCTTCTGT TCCGCCTCAA GATC
```

AT3G63440.1

Model type: Protein coding
Short Description: cytokinin oxidase/dehydrogenase 6
Curator Summary: This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Computational Description: cytokinin oxidase/dehydrogenase 6 (CKX6); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 6490 Blast hits to 6485 proteins in 1279 species: Archae - 163; Bacteria - 4080; Metazoa - 140; Fungi - 1069; Plants - 530; Viruses - 0; Other Eukaryotes - 508 (source: NCBI BLink).
Link: InterPro Scan - TAIR