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11-1420-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19554466 [Map]; Strand: w
      • AT2G47700.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-1420-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
    GCGAGACATG GTTTCTCATT GATTTTTGTT TGACAATCCT TTCTTTTCTT 
    TTTTTTTGTT CTTTCNAAAA ACGAAAATTT TCGTTAGTTC CCTCCGATTT 
    GGCCTGCTGG TGAANATATG GCCGAAGCTA AAGATTCGGG TTGCGATGAT 
    GATCTTCNAA TTGCTGGNGG ATGTGACCCT GGAAAACGCG GGAACCCGGA 
    GGATTCCTCG TCTCCTGTCG AAGTCTCGTG CTCGATTTGC CTCGAATCGG 
    NGCTCGATGA TGGTACCAGA TCCAAGGCTA AGCTCCAATG TGGTCACCAG 
    TTCCATTTGG GTAATTCATT CCCTTCCTCC ATCTNTTACC ATTTTGCGTT 
    TCCTCCATCA CAGTTTGATG ATCCGATGGC TTTTTGCTTG TACAAGCT

AT2G47700.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RED AND FAR-RED INSENSITIVE 2 (RFI2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05545.1); Has 457 Blast hits to 456 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 17; Plants - 198; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
Link
InterPro Scan - TAIR