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11-0816-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 825158 [Map]; Strand: c
      • AT3G03460.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -612; Region: promoter
      • AT3G03470.1 - [+] show detail - cytochrome P450, family 87, subfamily A, polypeptide 9
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0816-1 - 5-prime edge 
    CCTCCTGGTC ATTACTTGTC TTACCATAAG GTCACACACG ACACCGTTTT 
    GGGTGGATTT CTCATTCCGC GCCAAGGTAA ACATTATTCT TTTACATATA 
    TAGCCCATAT GATTCTTATT GCTTAGTAAA TTTAACAAAT AATCCGTAAC 
    CATTAAGTTA TGGCCCCCAC TAAGTCCAAT CGTTTTTGTA TTTGATTTTG 
    TGTCGGATTA GGTACTATAA ACTTTATGGT AGGAGAAATG GGCCGGGACC 
    CAAAAATATG GGAAGATCCT CTAACGTTCA AGCCAGAAAG ATTTCTAGAG 
    AACGGAGAAG CATGTGATTT TGATATGACG GGAACTCGCG AGATTAAAAT 
    GATGCCGTTT GGAGCGGGAC GACGGATGTG TCCCGGTTAC GCGCTTTCGT 
    TGCTTCATCT CGAATATTAT GTGGCCAATT TGGTTTGGAA ATTCGAGTGG 
    AAATGTGTGG AAGTTGAAGA AGTTGATCTA TCCGAGAAGC AACAGTTCAT 
    CACAATGGTC ATGAAAAACC CTTTCAAAGC AAATATTTAT CCAAGGAGAA 
    AGTGATATTT GCTTTTGTTA TATACATAAT CAAAAGGCCC ATTGGGCCAA 
    TTTGTCATAT GTATATTAAA AACTTTGTCT CATATGTATT AAAACAATTT 
    GGGCCTTTAA TGGGTTTCAA TATAAAGATG TCACACTTTT AGTTTTCGTT 
    TCCATCTTTC ATGGCGGAGA AGTAGACAAT TGCAACCAGA AAGAAACCCT 
    AA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 825226 [Map]; Strand: c
      • AT3G03460.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -680; Region: promoter
      • AT3G03470.1 - [+] show detail - cytochrome P450, family 87, subfamily A, polypeptide 9
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0816-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AGGAGGGTGT CTTCTTAGAC ACTCCAAGAT CACAGCTTTG AGGTAACTCA 
    ACTTCCCCAA ATCCTCTTCT CTGATCTCTT CTCTTTCTCC TTCTTCTCCG 
    GCGAACGCAC GTCTTCATTT CCTCGTATAC TTTCCTCTGT ATCTCTGGAT 
    ACNTTCACCA TGATCGCCAT GATCCACTGC ATCGACGTCG CCGTTGGATC

AT3G03460.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17510.1); Has 19732 Blast hits to 8747 proteins in 456 species: Archae - 0; Bacteria - 449; Metazoa - 7438; Fungi - 2099; Plants - 1550; Viruses - 53; Other Eukaryotes - 8143 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G03470.1

Model type
Protein coding
Short Description
cytochrome P450, family 87, subfamily A, polypeptide 9
Curator Summary
member of CYP89A
Computational Description
"cytochrome P450, family 87, subfamily A, polypeptide 9" (CYP89A9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 87, subfamily A, polypeptide 6 (TAIR:AT1G64940.1); Has 30488 Blast hits to 30273 proteins in 1588 species: Archae - 47; Bacteria - 2858; Metazoa - 11557; Fungi - 5907; Plants - 9145; Viruses - 0; Other Eukaryotes - 974 (source: NCBI BLink).
Link
InterPro Scan - TAIR