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11-0691-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21863766 [Map]; Strand: w
      • AT3G59130.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -959; Region: promoter
      • AT3G59140.1 - [+] show detail - multidrug resistance-associated protein 14
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: 11-0691-1 - 5-prime edge
    NNNNNGATNA NGGTACATGA NNATNGAANG GNCNANNACC GGTACCGGAT 
    NCNGGNGAGC AANCNGTGNC CGANAAGTGC AANCANGCAA ATTCTCGCCT
    GATNGNGTTT NNGANCAATN NNNGCTGCTG CATTAGNTAN CGAAGCCGNG
    GCTTCNGTAC AGGACTAATA CTCTGCTTCT TCTNAAAACT GCTCTGCCTA
    AACAGAACAA TTGTCTCTGT CCCATGCTCC AATTTGATCC ATCCTCCACA
    ACTATAAACA AAAATATAAC ACAACTCAAA ACATCTGACT TACTAGAAAT
    CTCTCTCTTA TAAGAAACTA AGATTTGTTA CCTAATGAAT CTAAGCCGTT
    CTCTTTTTCT TGAACCACTT CTTTTAGTTG ACACTTGCCA AGAACCTGCA
    TTTTTAGAAA ATAGCTTTTT GTTTAGTCTC AACTCCTTTA TAAGATTCAT
    GGTTTTCTCA AATGGGTTTT AAGATTTAGA CGTACCTCCC AAATCTCAGC
    ATCTGAATGC TGACACAAAG GATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21863659 [Map]; Strand: w
      • AT3G59130.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -852; Region: promoter
      • AT3G59140.1 - [+] show detail - multidrug resistance-associated protein 14
        Distance: 0; Region: intron10 (CDS)
    Flanking Genome Sequence: 11-0691-1 - 3-prime edge
    AGCGACGGTG AGTGTTGTTG CATCATCTTG ATCTGTTTTC TCCTCTGAAT 
    CTGTTTTTGA TGGTTTTGGT TTGCATTTTA GGACGAATTG TGGAATATGA
    TGAGCCAATG AAGTTGATGA AGGATGAGAA CTCTTTGTTC GGAAAGCT

AT3G59130.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G59120.1); Has 1035 Blast hits to 542 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 1023; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G59140.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 14
Curator Summary
member of MRP subfamily
Computational Description
multidrug resistance-associated protein 14 (MRP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 6 (TAIR:AT3G21250.2); Has 673798 Blast hits to 360971 proteins in 4075 species: Archae - 12279; Bacteria - 544381; Metazoa - 13093; Fungi - 8967; Plants - 6941; Viruses - 21; Other Eukaryotes - 88116 (source: NCBI BLink).
Link
InterPro Scan - TAIR