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Mutant Lines
11-0629-1

11-0629-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 108235 [Map]; Strand: w
  - AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
    Distance: 0; Region: intron1 (CDS)
  - AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 11-0629-1 - 5-prime edge
```
GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATGACT AGTTTGGATG ATAGTAACAA CGGAATGCAA 
TTCATTCTAT CGGATGAACA AATTGGTTTA GGCAAACAAA GAACTTTGTC 
AAAGACACGA CAACACTTTG CTCTACGGAT C
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 108190 [Map]; Strand: w
- AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
  Distance: 0; Region: intron1 (CDS)
- AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
  Distance: 0; Region: exon1 (5UTR)

ATCCNNACCG GAGATGTCAN GCCCTAACCC TNAANTAGNN TTTCTTAAAG 
AGCCATGAAT TGNTNGTTTA GATCCAATTA TAAGAAGGTT NAGACTCGAC 
TGTGATGATT GTTTGTGTTT TTGGTGGCAG GACCNGGAGG CNCAGANAGG 
GAGGATGCAG GAGATAGATC TTAGTGTTCA CACTATAAAG TCCCATGGAN 
GAAGANTCGC TTCTAAACAC AATCACNATN GGATCATACT CNTCATNTTG 
ATNGCCNTCG AGATAGGCTT GAACCTCATC CTCTCCTTTN TACCGNTNCG 
TGGGAAAAGA CATGATGACT GACCTCAAGT ACCCTTTCAA GGACAACACC 
GTACCTATNT GGTCTGTCCC TGTGTACGCT GTGCTTCTTC CCATCATANT 
GTTCGTCTGC TTCTACCTGA AGAGGACATG TGTGTACGAT CTGCACCACA 
GCATCCTCGG GCTGCTCTTC GCCGTCTTGA TAACTGGTGT CATCACTGAC 
TCCATNAAGG NAGCCACCGG ACGCCCTCGT CCTAACTTCT ACTGGCGCTG 
GNTTCCCCGA CGGCAAAAGA NCTGTNTGAT GCGTTGGGAG GGTGTGGTNT 
GCCACNGCAG GGCAGCTGAG GTCAANGAAA GGCCACANGA GCTTTCCNGA 
GCCGGACACA CTTCGCGGGN CCCTTTGCGG GGCNTAACAC TTCCTTTCCC 
TTTACCTTCT TTGGGAAANN CAGGGCCTTC ANCCATGAAG GGCCNTNGTG 
GTTNAN

AT2G01180.1

Model type: Protein coding
Short Description: phosphatidic acid phosphatase 1
Curator Summary: Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description: phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01180.2

Model type: Protein coding
Short Description: phosphatidic acid phosphatase 1
Curator Summary: Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description: phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR