InterPro Scan Result: AT3G01540.3

SEQUENCE: AT3G01540.3 CRC64: 22B36764260AFFBE LENGTH: 619 aa
InterPro
IPR000629
Conserved_site
RNA helicase, ATP-dependent, DEAD-box, conserved site
PS00039[309-317]T NA PS00039 DEAD_ATP_HELICASEDEAD_ATP_HELICASE
InterPro
IPR001202
Domain
WW/Rsp5/WWP
PF00397[19-49]T 9.4e-09 PF00397 WWWW
SM00456[18-51]T 6.3e-06 SM00456 no descriptionno description
PS01159[23-49]T NA PS01159 WW_DOMAIN_1WW_DOMAIN_1
PS50020[17-51]T 11.349 PS50020 WW_DOMAIN_2WW_DOMAIN_2
SSF51045[9-50]T 1.4e-08 SSF51045 WW domainWW domain
InterPro
IPR001650
Domain
Helicase, C-terminal
PF00271[426-497]T 1.4e-26 PF00271 Helicase_CHelicase_C
SM00490[417-497]T 5.1e-33 SM00490 no descriptionno description
PS51194[392-536]T 25.477 PS51194 HELICASE_CTERHELICASE_CTER
InterPro
IPR011545
Domain
DNA/RNA helicase, DEAD/DEAH box type, N-terminal
PF00270[182-351]T 7.9e-50 PF00270 DEADDEAD
InterPro
IPR014001
Domain
DEAD-like helicase
SM00487[177-380]T 8.1e-63 SM00487 no descriptionno description
PS51192[189-363]T 30.145 PS51192 HELICASE_ATP_BIND_1HELICASE_ATP_BIND_1
InterPro
IPR014014
Domain
RNA helicase, DEAD-box type, Q motif
PS51195[158-186]T 11.081 PS51195 Q_MOTIFQ_MOTIF
noIPR
unintegrated
unintegrated
G3DSA:2.20.70.10[16-50]T 1.8e-05 G3DSA:2.20.70.10 no descriptionno description
G3DSA:3.40.50.300[142-367]T 3.1e-74 G3DSA:3.40.50.300 no description[375-535]T 1.3e-56 G3DSA:3.40.50.300 no descriptionno description
PTHR24031[138-596]T 1.2e-277 PTHR24031 FAMILY NOT NAMEDFAMILY NOT NAMED
PTHR24031:SF50[138-596]T 1.2e-277 PTHR24031:SF50 SUBFAMILY NOT NAMEDSUBFAMILY NOT NAMED
seg[2-7]? NA seg seg[61-71]? NA seg seg[125-139]? NA seg seg[489-507]? NA seg seg[547-569]? NA seg seg[575-596]? NA seg seg[598-609]? NA seg segseg
SSF52540[229-520]T 1.7e-73 SSF52540 P-loop containing nucleoside triphosphate hydrolasesP-loop containing nucleoside triphosphate hydrolases
SEQUENCE: AT3G01540.3 CRC64: 22B36764260AFFBE LENGTH: 619 aa
InterPro
IPR000629
Conserved_site
RNA helicase, ATP-dependent, DEAD-box, conserved site
PROSITEPS00039DEAD_ATP_HELICASE
 NA [309-317]T    
Parentno parent
Childrenno children
Found inIPR011545IPR014001
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: ATP-dependent helicase activity (GO:0008026)
InterPro
IPR001202
Domain
WW/Rsp5/WWP
PFAMPF00397WW
 9.4e-09 [19-49]T    
SMARTSM00456no description
 6.3e-06 [18-51]T    
PROSITEPS01159WW_DOMAIN_1
 NA [23-49]T    
PROFILEPS50020WW_DOMAIN_2
 11.349 [17-51]T    
SUPERFAMILYSSF51045WW domain
 1.4e-08 [9-50]T    
Parentno parent
Childrenno children
Found inIPR016344IPR017433
Containsno entries
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR001650
Domain
Helicase, C-terminal
PFAMPF00271Helicase_C
 1.4e-26 [426-497]T    
SMARTSM00490no description
 5.1e-33 [417-497]T    
PROFILEPS51194HELICASE_CTER
 25.477 [392-536]T    
Parentno parent
Childrenno children
Found inIPR000185IPR004576IPR004589IPR004609IPR004807IPR005259IPR006293IPR006474IPR010222IPR010225IPR013444IPR014018IPR014412IPR016438IPR017170IPR017575IPR022307
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: helicase activity (GO:0004386)
Molecular Function: ATP binding (GO:0005524)
InterPro
IPR011545
Domain
DNA/RNA helicase, DEAD/DEAH box type, N-terminal
PFAMPF00270DEAD
 7.9e-50 [182-351]T    
ParentIPR014001
Childrenno children
Found inIPR004576IPR004589IPR004609IPR005259IPR005736IPR006293IPR016438IPR017170IPR022307
ContainsIPR000629
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: ATP-dependent helicase activity (GO:0008026)
InterPro
IPR014001
Domain
DEAD-like helicase
SMARTSM00487no description
 8.1e-63 [177-380]T    
PROFILEPS51192HELICASE_ATP_BIND_1
 30.145 [189-363]T    
Parentno parent
ChildrenIPR006935IPR011492IPR011545
Found inIPR000330IPR003450IPR004473IPR004483IPR004589IPR004807IPR006293IPR006310IPR006474IPR010222IPR010225IPR017548IPR017575IPR022307
ContainsIPR000629IPR002464IPR010614IPR014013
GO termsnone
InterPro
IPR014014
Domain
RNA helicase, DEAD-box type, Q motif
PROFILEPS51195Q_MOTIF
 11.081 [158-186]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone
noIPR
unintegrated
unintegrated
GENE3DG3DSA:2.20.70.10no description
 1.8e-05 [16-50]T    
GENE3DG3DSA:3.40.50.300no description
 3.1e-74 [142-367]T  1.3e-56 [375-535]T   
PANTHERPTHR24031FAMILY NOT NAMED
 1.2e-277 [138-596]T    
PANTHERPTHR24031:SF50SUBFAMILY NOT NAMED
 1.2e-277 [138-596]T    
SEGsegseg
 NA [2-7]?  NA [61-71]?  NA [125-139]?  NA [489-507]? 
 NA [547-569]?  NA [575-596]?  NA [598-609]?  
SUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolases
 1.7e-73 [229-520]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone