InterPro Scan Result: AT1G48900.1

SEQUENCE: AT1G48900.1 CRC64: 5B03EE98CE8483BF LENGTH: 495 aa
InterPro
IPR000897
Domain
Signal recognition particle, SRP54 subunit, GTPase
PF00448[102-296]T 3.2e-76 PF00448 SRP54SRP54
SM00962[101-296]T 8.8e-94 SM00962 no descriptionno description
PS00300[269-282]T NA PS00300 SRP54SRP54
InterPro
IPR003593
Domain
ATPase, AAA+ type, core
SM00382[100-277]T 0.0048 SM00382 no descriptionno description
InterPro
IPR004125
Domain
Signal recognition particle, SRP54 subunit, M-domain
G3DSA:1.10.260.30[327-433]T 2.1e-26 G3DSA:1.10.260.30 no descriptionno description
PF02978[327-428]T 3.2e-28 PF02978 SRP_SPBSRP_SPB
SSF47446[298-433]T 1.5e-40 SSF47446 Signal peptide-binding domainSignal peptide-binding domain
InterPro
IPR006325
Family
Signal recognition particle, SRP54 subunit
TIGR01425[2-428]T 0 TIGR01425 SRP54_euk: signal recognition particle protSRP54_euk: signal recognition particle prot
InterPro
IPR013822
Domain
Signal recognition particle, SRP54 subunit, helical bundle
G3DSA:1.20.120.140[5-89]T 8.2e-16 G3DSA:1.20.120.140 no descriptionno description
PF02881[6-83]T 4.2e-13 PF02881 SRP54_NSRP54_N
SM00963[2-87]T 1.8e-12 SM00963 no descriptionno description
SSF47364[1-95]T 3.5e-21 SSF47364 Domain of the SRP/SRP receptor G-proteinsDomain of the SRP/SRP receptor G-proteins
noIPR
unintegrated
unintegrated
G3DSA:3.40.50.300[97-297]T 3.5e-62 G3DSA:3.40.50.300 no descriptionno description
PTHR11564[1-434]T 2.5e-288 PTHR11564 FAMILY NOT NAMEDFAMILY NOT NAMED
PTHR11564:SF5[1-434]T 2.5e-288 PTHR11564:SF5 SIGNAL RECOGNITION PARTICLE 54 KDA PROTEINSIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN
seg[91-101]? NA seg seg[227-238]? NA seg seg[480-495]? NA seg segseg
SSF52540[93-298]T 3.2e-53 SSF52540 P-loop containing nucleoside triphosphate hydrolasesP-loop containing nucleoside triphosphate hydrolases
SEQUENCE: AT1G48900.1 CRC64: 5B03EE98CE8483BF LENGTH: 495 aa
InterPro
IPR000897
Domain
Signal recognition particle, SRP54 subunit, GTPase
PFAMPF00448SRP54
 3.2e-76 [102-296]T    
SMARTSM00962no description
 8.8e-94 [101-296]T    
PROSITEPS00300SRP54
 NA [269-282]T    
ParentIPR003593
Childrenno children
Found inIPR004390IPR004780IPR006325
Containsno entries
GO termsMolecular Function: GTP binding (GO:0005525)
Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614)
InterPro
IPR003593
Domain
ATPase, AAA+ type, core
SMARTSM00382no description
 0.0048 [100-277]T    
Parentno parent
ChildrenIPR000523IPR000897IPR002078IPR003439IPR003959IPR013093
Found inIPR000194IPR000388IPR000844IPR001208IPR001475IPR001482IPR001957IPR001984IPR002543IPR002611IPR003450IPR004482IPR004483IPR004487IPR004504IPR004663IPR004665IPR004948IPR005714IPR005722IPR005726IPR005736IPR006321IPR006344IPR006345IPR007692IPR007694IPR008046IPR008047IPR008050IPR009147IPR010128IPR010222IPR010230IPR011579IPR011703IPR011704IPR011938IPR011939IPR011940IPR011941IPR012099IPR013305IPR013317IPR013369IPR013380IPR013462IPR013632IPR013765IPR014217IPR014277IPR014588IPR014759IPR014774IPR016300IPR016366IPR016467IPR016527IPR017466IPR017691IPR018324IPR020005IPR020064IPR020591IPR020793IPR022374IPR022425IPR022426IPR022443IPR022482IPR022514IPR022515
ContainsIPR003960IPR007807IPR015850IPR015851IPR015854IPR015858IPR017871IPR018368IPR018525IPR020584IPR020588
GO termsMolecular Function: nucleotide binding (GO:0000166)
Molecular Function: nucleoside-triphosphatase activity (GO:0017111)
InterPro
IPR004125
Domain
Signal recognition particle, SRP54 subunit, M-domain
GENE3DG3DSA:1.10.260.30no description
 2.1e-26 [327-433]T    
PFAMPF02978SRP_SPB
 3.2e-28 [327-428]T    
SUPERFAMILYSSF47446Signal peptide-binding domain
 1.5e-40 [298-433]T    
Parentno parent
Childrenno children
Found inIPR004780IPR006325
Containsno entries
GO termsBiological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614)
Molecular Function: 7S RNA binding (GO:0008312)
Cellular Component: signal recognition particle (GO:0048500)
InterPro
IPR006325
Family
Signal recognition particle, SRP54 subunit
TIGRFAMsTIGR01425SRP54_euk: signal recognition particle prot
 0 [2-428]T    
Parentno parent
Childrenno children
Found inno entries
ContainsIPR000897IPR004125IPR013822
GO termsMolecular Function: GTP binding (GO:0005525)
Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614)
Molecular Function: 7S RNA binding (GO:0008312)
Cellular Component: signal recognition particle (GO:0048500)
InterPro
IPR013822
Domain
Signal recognition particle, SRP54 subunit, helical bundle
GENE3DG3DSA:1.20.120.140no description
 8.2e-16 [5-89]T    
PFAMPF02881SRP54_N
 4.2e-13 [6-83]T    
SMARTSM00963no description
 1.8e-12 [2-87]T    
SUPERFAMILYSSF47364Domain of the SRP/SRP receptor G-proteins
 3.5e-21 [1-95]T    
Parentno parent
Childrenno children
Found inIPR004390IPR004780IPR006325
Containsno entries
GO termsMolecular Function: GTP binding (GO:0005525)
Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614)
noIPR
unintegrated
unintegrated
GENE3DG3DSA:3.40.50.300no description
 3.5e-62 [97-297]T    
PANTHERPTHR11564FAMILY NOT NAMED
 2.5e-288 [1-434]T    
PANTHERPTHR11564:SF5SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN
 2.5e-288 [1-434]T    
SEGsegseg
 NA [91-101]?  NA [227-238]?  NA [480-495]?  
SUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolases
 3.2e-53 [93-298]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone